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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0791s0013.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | B3 | ||||||||
Protein Properties | Length: 683aa MW: 74961.5 Da PI: 6.5948 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 62.2 | 8.6e-20 | 543 | 640 | 2 | 96 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 +kvl++sdv+++gr+vlpkk ae+h ++ + ++ + +ed ++++W++++++ ++ks++y+l+ ++ +Fv++ngL+egDf+v++ + Kalax.0791s0013.1.p 543 QKVLKQSDVGSLGRIVLPKKEAETHlpQLTARDGINIAMEDiGTSNVWNMRYRFwpNNKSRMYLLE-NTGDFVRSNGLQEGDFIVIY--S 629 79*************************999999********7778*******99777777777777.********************..6 PP S.SEE..EEEE CS B3 87 r.sefelvvkv 96 + ++++++++ Kalax.0791s0013.1.p 630 DiKCGKYMIRG 640 77999888765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.8E-27 | 536 | 648 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10015 | 9.68E-34 | 540 | 641 | No hit | No description |
SuperFamily | SSF101936 | 4.45E-22 | 541 | 635 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 10.306 | 542 | 644 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 6.5E-19 | 542 | 644 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 4.8E-16 | 543 | 639 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 683 aa Download sequence Send to blast |
MKDDTGVAEY EKSDNLLHAA PLDSAGMEDN DVMLDLSCFG GCGYDSAAAA MEEADHQDLM 60 DSAAAIFCDD LIPPLPDFQC MSSSSSSSSS VKPVAYKSTA SSSVSSTSSS WAVLRSESEE 120 HNAVAGGYTS HHDHSHGHHP QQVVREQSNG LDEDGDIGCM DVMETLSYID LLDESGQVWG 180 YKDSPIFYSS PVEAFQAENE LQRPEPMAET HTEGLDKSED LAMVFFEWLK SNRESISAED 240 LRSIKLKKST IESAAKRLGN GKDGMKRLLQ LILEWVQHHQ LQRKPSREEG EAAAAAQPQF 300 PNHPYPDTNN FQPDLSHTSP WSVGSSAGLD PMMAVGVPAP FGHLDQPWPP LCMNYDNSAN 360 AGQNLTPAAH PFGAAAFNQY PCQYYPAVGN VSYVNGAVSE EVFVRTGSAA TKEARKKRMA 420 RQRRFLPHHR HHHHHSSSGN GNAHGQHHGR NGLSNQMRML AGAGQLGRVN MDESCANISR 480 PPSGGYWAYL HNASPPQPPH LPVVPNSGNS IQGNEESPSY QRPIALDRRQ GSKPEKNLRF 540 LLQKVLKQSD VGSLGRIVLP KKEAETHLPQ LTARDGINIA MEDIGTSNVW NMRYRFWPNN 600 KSRMYLLENT GDFVRSNGLQ EGDFIVIYSD IKCGKYMIRG VKVRQQGPKP DIRRSGKALK 660 KNTWPTSNGS PFAPPSPKTP LA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012085841.1 | 1e-139 | PREDICTED: B3 domain-containing transcription factor ABI3 | ||||
TrEMBL | R4TV46 | 1e-139 | R4TV46_POPTO; ABI3 | ||||
STRING | POPTR_0002s25330.1 | 1e-134 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24650.1 | 1e-109 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0791s0013.1.p |